Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883013.1_cds_XP_016438349.1_34019
CDS Infomation

[gene=LOC107764303] [db_xref=GeneID:107764303] [protein=3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like] [protein_id=XP_016438349.1] [location=join(3196..3370,4195..4400,4474..4677,4961..5071,5158..5253,5416..5461,5578..5657,6350..6418,6554..6638,7673..7827,7924..8004,10510..10569,11024..11140)] [gbkey=CDS]
Sequence

ATGGCGTCATCGACGGTATCGTCATGGGTAATGGGTTCAACATGCATGTCAGTCGCTTGT
GAAAGAGAACATGATAAACATTCTTTGTTTGGGATTTCTTCTAAGTCTAAATGCAAATGG
GCTTCTCAAACTAGAACCAGGGTTTTGCCAAAGTCCAAATCCACTGCGCAAATAGGGGAG
GTAATGGCAATTGCTGCCCAACCGGCCATGGAAGTTGCAGTAAAGAAGAAACCTCTGACC
AAGGAAAGGCGAGTTGTTGTGACAGGGATGGGTGTTGAAACACCGCTTGGTCATGATCCC
CATGAATTTTATGAAAATCTGCTCCAAGGTGTCAGTGGCATAAGTGAGATCGAAGCTTTT
GACTGTTCACAGTATCCAACAAGAATTGCTGGAGAGATCAAGTCTTTCTCGACTGATGGT
TGGGTTGCACCCAAACTTTCTAAAAGAATGGACAGGTTCATGCTTTACATGATAACAGCT
GGTAAGAAAGCACTGTCAGATGGTGGAATTACTGAAGACATTATGGATGAATTGGATAAA
AGAAGATGTGGAGTTTTAATTGGCTCTGCTTTGGGTGGAATGAAGGTTTTTAATGATGCA
GTAGAGGCTTTAAGGGTTTCGTATAGGAAGATGAATCCTTTTTGTGTTCCATTTGCAACT
ACAAACATGGGTTCTGCCATGCTTGCCATGGACCTGGGATGGATGGGTCCAAATTATTCA
ATTTCAACAGCATGTGCTACAAGCAACTTCTGCATATTGAATGCTGCTAACCACATCATT
AGAGGTGAAGCTGACTTGATGCTGTGCGGTGGATCAGATGCAGCAATTATACCAATTGGA
TTGGGAGGATTTGTTGCATGCAGAGCGCTTTCACAGCGAAATGGTGACCCTGCAAGAGCT
TCTCGGCCTTGGGATAGTAATCGCGATGGATTTGTTATGGGTGAAGGAGCCGGAGTCCTG
CTTCTGGAAGAACTTGAGCATGCCAAGCAAAGAGGTGCAACTATCTATGCTGAATTTCTG
GGTGGAAGTTTTACTTGTGATGCTTATCACATGACAGAGCCTCATCCTGAAGGAACTGGA
GTCATCCTATGCATAGAGAAGGCATTAGCTCAGTCAGGGGTATCCAAGGAAGATGTAAAC
TACATTAATGCGCATGCTACATCCACACTAGCAGGAGATATTAAGGAGTATCAAGCTCTT
CTCCATTGCTTTGGCCAGAATCCAGAGTTGCGAGTTAACTCCACAAAATCTATGATTGGT
CACCTGCTTGGAGCTGCTGGTGCTGTTGAAGCTGTGGCAACTATTCAGGCAATACGAACT
GGTTGGGTTCATCCAAATATTAATCTGGAAAACCCAGATGAAGGCGTGGATACAACTAAA
CTTGTGGGTCCCAAAAAGGAACGACTGGATATTAAGGTGGCATTATCTAATTCATTTGGA
TTTGGTGGCCACAACTCATCAATCTTATTTGCTCCTTACAAGTAG

Peptide Sequence

PEP ID

XP_016438349.1
PEP Infomation

PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Nicotiana tabacum]
Sequence

MASSTVSSWVMGSTCMSVACEREHDKHSLFGISSKSKCKWASQTRTRVLPKSKSTAQIGE
VMAIAAQPAMEVAVKKKPLTKERRVVVTGMGVETPLGHDPHEFYENLLQGVSGISEIEAF
DCSQYPTRIAGEIKSFSTDGWVAPKLSKRMDRFMLYMITAGKKALSDGGITEDIMDELDK
RRCGVLIGSALGGMKVFNDAVEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS
ISTACATSNFCILNAANHIIRGEADLMLCGGSDAAIIPIGLGGFVACRALSQRNGDPARA
SRPWDSNRDGFVMGEGAGVLLLEELEHAKQRGATIYAEFLGGSFTCDAYHMTEPHPEGTG
VILCIEKALAQSGVSKEDVNYINAHATSTLAGDIKEYQALLHCFGQNPELRVNSTKSMIG
HLLGAAGAVEAVATIQAIRTGWVHPNINLENPDEGVDTTKLVGPKKERLDIKVALSNSFG
FGGHNSSILFAPYK

Transcript Sequence

Gene sequence data has not been registered.